Web11 de mai. de 2013 · # 2) package user manual. ... To complete the entire analysis, diveRsity took 3 min 20·1 s, while hierfstat took 6 min 44·8 sec, using the same laptop … Web22 de jun. de 2015 · Should be all fixed now: check() Updating hierfstat documentation Loading hierfstat Writing betas.Rd Writing fstat.from.adegenet.Rd Writing gstat.randtest.Rd
Tutorial Basics - adegenet on the web
Web将双等位基因SNP从hierfstat格式转换为剂量格式: boot.ppfis: 在群体的Fis位点上执行自举: boot.ppfst: 在成对Fst的轨迹上执行自举: boot.vc: 方差分量的Bootstrap置信区间: cont.isl: 大陆-岛屿模式中二倍体生物的遗传数据集: cont.isl99: 大陆-岛屿模式中二倍体生物的遗传数据集 ... WebFrom GenoDive manual: 'In general, rather than to test differentiation between all pairs of populations, it is advisable to perform an overall test of population differentiation, possibly using a hierarchical population structure, (see AMOVA)'. To compute an AMOVA, use GenoDive or Phi_st_Meirmans in mmod. hierfstat daley thompson decathlon game spectrum
Genetic Analysis of Populations with Mixed Reproduction
Web26 de out. de 2024 · In short: I have a fasta data file (PvMtFas) made into a genind object (PvMtGen) and added @pop from another file (PvMtData) which contains some NA in the column I am using (and contains loads of other data I use). These NA appear to be stopping me from using the basic.stats and wc commands from hierfstat. Any easy solutions? Web14 de jul. de 2024 · To answer this, browse hierfstat help [optional] explore hierfstat help and identify other functions allowing to simulate genotypic data. Describe them briefly … WebPackage ‘hierfstat’ October 13, 2024 Version 0.5-11 Date 2024-05-03 Title Estimation and Tests of Hierarchical F-Statistics Author Jerome Goudet [aut, cre], Thibaut Jombart … daley thompson\\u0027s decathlon spectrum